Entries Tagged 'Media coverage' ↓

A user case inspired by Flash Forward and a poll

[Connotea] [del.icio.us] [Digg] [diigo] [Google] [LinkedIn] [Reddit] [StumbleUpon] [Email]

Flash Forward is unsurprisingly one of the most exciting TV show of this year. As a result, I’m dying to watch a new episode every week. And when I do, I’m having a great time that leads to great discussions at the office about whether this is about future or not and how it can be modified. Nevertheless, I could notice a few weeks ago the interesting case of Edward Ned (also called Ned Ned) whose flash forward vision finds him in a club and having his skin totally black, whereas he’s white currently. Dr. Olivia Benford chooses to treat him as a regular patient no matter his flash forward but Dr. Bryce Varley -her colleague and now totally changed by his flash forward- has another opinion. Indeed, he thinks that this color change may be due to a disease; and that would explain many things regarding this patient. This is why he decides to refer to an online search engine to look for more information.

In order to know more about this Ned’s health condition, Bryce looks for “Pigment Change” in a symptoms search engine. His search returns 107 results and then helps him explain afetrwards that:

- Ned may have Addison’s disease which would explain why he’s black in the future (as he sees himself in his flashforward)
- The disease forces his body make melanine compounds instead of adrenaline
- Without Adrenaline his body is unable to build proper stress response (which explains he’s being so serene)

Obviously, novoseek has different goals (to the webpage Bryce is using) as it offers to explore the scientific literature. Nevertheless we can search for that disease -Addison’s disease- and observe what are the results like.

  1. A search for Addison’s disease via the Advanced Search panel returns 2,563 results in Medline.
  2. Observing the related concepts sidebar we can see that the most relevant diseases related to Addison’s disease are: Adrenal insufficiencies, primary adrenal insufficiency, autoimmune addisons disease, diabetes and Hyperpigmentation (with a relevance of 41%).
  3. addison_related_diseases
  4. Also, the most relevant related Signs and Symptoms indicate: alopecia, fatigue, malaise, cryoglobulinemic purpura, scalp pruritus…
  5. We click the “hyperpigmentation” disease and it is added to the current search: there are now 66 results in Medline
  6. From there, we can start exploring the literature and read interesting publications such as Adrenal autoantibodies and organ-specific autoimmunity in patients with Addison’s disease, Generalized pigmentation due to Addison disease., Long-lasting subclinical Addison’s disease..
  7. The reading of these is a good starting point to know more about the disease, its origins and possible treatments.

Obviously, this complementary information helps save Ned during surgery and Dr. Olivia Benford now has to admit that Ned’s Flash Forward actually helped save him. Based on that, we see the importance of research to know more about a disease, its symptoms and the existing treatments. Furthermore, a search for Addison’s Disease in US Grants could help know what are the current studies about this disease.

And now, I’m asking you:

Do you think Dr. Bryce Varley should use novoseek next time?

View Results

Loading ... Loading ...

dr_bryce_varley

NIH public access policy made permanent, new challenges

[Connotea] [del.icio.us] [Digg] [diigo] [Google] [LinkedIn] [Reddit] [StumbleUpon] [Email]
Old book

Old book

Good news!!! Today I have seen that the NIH initiative of public access policy will be made permanent. This is quite some time in a so competitive area as Science. Since the policy was implemented the percentage of manuscript sent to PMC has increase over 3,000 new articles each month.

If the information was overwhelming enough with 2,000 new articles per day -more than 18M scientific articles all together- the free access to full articles will increase the amount of data relevant to biomedicine. This increase is not only on the side of number of articles available but also on the total amount of information since the whole text of the article is going to be accessible. This brings new interesting challenges.

The question now is, how do we get through all the new information fast and efficiently? System that helps get relevant scientific information such as novoseek are more needed than ever.

However, is it really useful for scientists to have the results freely available 1 year behind? Obviously it is not the best possible scenario but the analysis of literature and Grant information could give us an insight on what would be new potential upcoming articles.